Package index

Model fitting

Fit the Dirichlet Process Mixture Model and draw posterior samples.

runModel()

Fit DPMM

posterior_dpmm()

Sample from DPMM

sumLogPostDens()

Sum-posterior-log-density

sampler_conditional_RW()

Conditional Random Walk Sampler

sampler_conditional_RW_block()

Conditional Block Random Walk Sampler

Prediction

Generate predictions from a fitted DPMM.

predict_dpmm_fit()

Predict from DPMM

Diagnostics and plotting

Visualise model fit, convergence, and pairwise relationships.

plot_alpha()

Diagnostic Plot

plot_dpmm_fit()

Plot Parameter Trace plots

plot_ggpairs()

Pairs Plot

Synthetic datasets

Example datasets used to demonstrate and test the package.

dataset_1

Synthetic dataset 1

dataset_2

Synthetic dataset 2

dataset_3

Synthetic dataset 3

dataset_4

Synthetic dataset 4

dataset_5

Synthetic dataset 5

dataset_6

Synthetic dataset 6